User Guide
==========

This section contains guides and documents about Pyrodigal usage.

.. toctree::
   :maxdepth: 1
   :caption: Getting Started

    Installation <install>
    Output Formats <outputs>
    Command Line Interface <cli>
    Parallelism <parallel>
    Publications <publications>

.. toctree::
   :maxdepth: 1
   :caption: Resources

   Benchmarks <benchmarks>
   Contribution Guide <contributing>
   Changelog <changes>
   Copyright Notice <copyright>