API Reference
=============

.. toctree::
   :hidden:

   orf_finder <orf_finder>
   training_info <training_info>
   genes <genes>
   nodes <nodes>
   sequence <sequence>


.. currentmodule:: pyrodigal


.. only:: html

    OrfFinder
    ---------

    .. autosummary::
        :nosignatures:

        pyrodigal.OrfFinder


    TrainingInfo
    ------------

    .. autosummary::
       :nosignatures:

       pyrodigal.TrainingInfo
       pyrodigal.MetagenomicBin


    Genes
    -----

    .. autosummary::
       :nosignatures:

       pyrodigal.Genes
       pyrodigal.Gene

    Nodes
    -----

    .. autosummary::
       :nosignatures:

       pyrodigal.Nodes
       pyrodigal.Node

    Sequence
    --------

    .. autosummary::
       :nosignatures:

       pyrodigal.Sequence